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Intron Name: Anas_platyrhynchos_platyrhynchos_2_90728730_90729240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90728730 - 90729240

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCATT

5'SS Class:

strong_major

3'SS Sequence:

ATCGTCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

ACTGACATAATC

Flanking Amino Acid:

RGAHAREDYKVRIDEFDYSK

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

83.5

35.1

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

67.1

0.39

0.8

58.7

37.7

Minor 5ss

0.17

2.5

74.6

41.7

Minor BPS

47.8

-0.1

1.9

58.48

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007326

90728167 - 90739065

10899