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Intron Name: Anas_platyrhynchos_platyrhynchos_2_90742162_90742325_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90742162 - 90742325

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

TCGTACGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

GTTGCTCTAACC

Flanking Amino Acid:

LVPMLGLAAFRWIWTRECQK

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.3

63.5

42.9

Major BPS

72.3

0.55

73.3

28.9

Major PPT

73.4

0.53

69.3

41.4

Minor 5ss

32.5

-2

2.7

41.4

38.2

Minor BPS

59.4

0.28

1.8

71.68

39.5

Associated Gene:

Gene:

CCDC127

Ensembl Gene ID:

ENSAPLG00000029505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037939

90741642 - 90744213

2572