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Intron Name: Anas_platyrhynchos_platyrhynchos_2_90775240_90777799_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

90775240 - 90777799

Intron Length:

2560

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCCACCAAG

5'SS Class:

weak_major

3'SS Sequence:

ATGCCCCCTGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TACCCGTTGACA

Flanking Amino Acid:

ALSLPAHGLFAPKEDSRPKW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.2

0.15

1.3

48.9

47.1

Major BPS

67.6

0.44

1.2

Major PPT

59.2

0.21

57.7

32.9

Minor 5ss

29.5

-2.3

3.8

36.8

41.6

Minor BPS

51.8

0.05

2.1

64.84

41.4

Associated Gene:

Gene:

SLC6A18

Ensembl Gene ID:

ENSAPLG00000023971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026403

90775182 - 90802532

27351