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Intron Name: Anas_platyrhynchos_platyrhynchos_2_90777926_90785622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90777926 - 90785622

Intron Length:

7697

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

ATTATCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTGATCTTAATT

Flanking Amino Acid:

FPYLCQIHGGGAFLIPYFIA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

66.8

44.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

82.9

0.74

0.9

40.9

Minor 5ss

36.1

-1.6

3.2

49.4

46.3

Minor BPS

74.7

0.85

1.2

84.08

37.1

Associated Gene:

Gene:

SLC6A18

Ensembl Gene ID:

ENSAPLG00000023971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026403

90775182 - 90802532

27351