Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_90821858_90826356_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90821858 - 90826356

Intron Length:

4499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTTTATT

5'SS Class:

major

3'SS Sequence:

TCTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

TGGAGCATAATG

Flanking Amino Acid:

TLSKESRAKKADVSRAFDSI

Intron Amino Acid Position:

864

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

81.5

31.4

Major BPS

68.5

0.46

73.3

28.9

Major PPT

86.1

0.81

0.8

84.1

30.8

Minor 5ss

42.4

-0.8

2.8

59.8

44.7

Minor BPS

44.6

-0.5

2.1

49.76

44.1

Associated Gene:

Gene:

TERT

Ensembl Gene ID:

ENSAPLG00000004975

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005206

90806509 - 90835778

29270