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Intron Name: Anas_platyrhynchos_platyrhynchos_2_90830266_90832848_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
90830266 - 90832848

Intron Length:
2583

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTTAAC

5'SS Class:
major

3'SS Sequence:
TCTTTTGTTGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTCAAT

U12 Branch Point Sequence:
TTTGCTATAACT

Flanking Amino Acid:
NDCMWLRLAKGNHFVPASEH

Intron Amino Acid Position:
735

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79
0.68
1
76
33.1

Major BPS
76.9
0.67
1.2
85
31.9

Major PPT
76.8
0.6
1.1
78.6
33.6

Minor 5ss
42.2
-0.9
2.5
54
43.3

Minor BPS
69.3
0.68
1.7
88.67
36.3

Associated Gene:

Gene:
TERT

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

90808872 - 90835778
26907

90806509 - 90835778
29270

90806509 - 90835778
29270

90806509 - 90835778
29270

90806509 - 90835778
29270