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Intron Name: Anas_platyrhynchos_platyrhynchos_2_90857759_90858063_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90857759 - 90858063

Intron Length:

305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTATCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TTTTCCATATTC

Flanking Amino Acid:

YSWLINSFVNGVYAFGFLFM

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

71.8

39.7

Major BPS

65.3

0.38

71.6

30.1

Major PPT

81.7

0.71

0.8

78.6

34.3

Minor 5ss

31.9

-2.1

2.9

43.6

43.3

Minor BPS

63.6

0.41

1.9

79.37

Associated Gene:

Gene:

CLPTM1L

Ensembl Gene ID:

ENSAPLG00000004129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042716

90853675 - 90880490

26816

ENSAPLT00000004280

90852129 - 90880490

28362