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Intron Name: Anas_platyrhynchos_platyrhynchos_2_90858099_90859887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90858099 - 90859887

Intron Length:

1789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTAA

5'SS Class:

major

3'SS Sequence:

TTCTTGTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

GAAAAAGTAACT

Flanking Amino Acid:

GYSLLNVKYKSWYSWLINSF

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

64.9

37.3

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

84.4

0.77

0.8

80.5

31.5

Minor 5ss

-1.7

3.4

46.8

48.5

Minor BPS

41.5

-0.5

2.3

58.59

43.1

Associated Gene:

Gene:

CLPTM1L

Ensembl Gene ID:

ENSAPLG00000004129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042716

90853675 - 90880490

26816

ENSAPLT00000004280

90852129 - 90880490

28362