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Intron Name: Anas_platyrhynchos_platyrhynchos_2_90864244_90865251_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90864244 - 90865251

Intron Length:

1008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCCC

5'SS Class:

major

3'SS Sequence:

TCTCCCAATCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAAATATTAATA

Flanking Amino Acid:

RSMIGMSTKAVLWRCFSTVV

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

63.1

41.4

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

67.8

0.4

0.9

59.7

35.8

Minor 5ss

38.1

-1.3

3.2

51.2

45.5

Minor BPS

54.7

0.14

1.6

63.35

36.3

Associated Gene:

Gene:

CLPTM1L

Ensembl Gene ID:

ENSAPLG00000004129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042716

90853675 - 90880490

26816

ENSAPLT00000004280

90852129 - 90880490

28362