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Intron Name: Anas_platyrhynchos_platyrhynchos_2_90865337_90867364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90865337 - 90867364

Intron Length:

2028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

TTTTAAGCAAAT

Flanking Amino Acid:

ALTFFVAAFHLLFDFLAFKN

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

74.4

36.1

Major BPS

75.6

0.64

1.5

34.5

Major PPT

82.8

0.74

0.9

77.4

35.8

Minor 5ss

34.5

-1.8

3.3

44.7

43.5

Minor BPS

42.6

-0.4

2.5

72.23

43.8

Associated Gene:

Gene:

CLPTM1L

Ensembl Gene ID:

ENSAPLG00000004129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042716

90853675 - 90880490

26816

ENSAPLT00000004280

90852129 - 90880490

28362