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Intron Name: Anas_platyrhynchos_platyrhynchos_2_90867460_90869436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90867460 - 90869436

Intron Length:

1977

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TCTTGTATAATT

Flanking Amino Acid:

QDAVYSLQQFGFSEKDADEV

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

88.1

0.86

0.6

84.9

22.8

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

53.8

0.2

76.08

41.4

Associated Gene:

Gene:

CLPTM1L

Ensembl Gene ID:

ENSAPLG00000004129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042716

90853675 - 90880490

26816

ENSAPLT00000004280

90852129 - 90880490

28362