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Intron Name: Anas_platyrhynchos_platyrhynchos_2_90869555_90874751_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90869555 - 90874751

Intron Length:

5197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGAAATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTGCTATTAAAC

Flanking Amino Acid:

QLSNRVKDLMVINRSTTELP

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

84.9

26.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

68.5

0.42

1.1

64.3

45.2

Minor 5ss

32.1

-2

2.8

39.2

40.5

Minor BPS

54.1

0.11

1.7

66.19

38.8

Associated Gene:

Gene:

CLPTM1L

Ensembl Gene ID:

ENSAPLG00000004129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042716

90853675 - 90880490

26816

ENSAPLT00000004280

90852129 - 90880490

28362