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Intron Name: Anas_platyrhynchos_platyrhynchos_2_90876857_90878013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90876857 - 90878013

Intron Length:

1157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

GTATTTTTAAAG

Flanking Amino Acid:

NLLTGESTTQQIEAEKQTSA

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

67.1

44.6

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

74.3

0.55

1.1

74.6

39.1

Minor 5ss

30.7

-2.2

3.4

40.1

Minor BPS

60.9

0.21

1.5

61.86

39.9

Associated Gene:

Gene:

CLPTM1L

Ensembl Gene ID:

ENSAPLG00000004129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042716

90853675 - 90880490

26816

ENSAPLT00000004280

90852129 - 90880490

28362