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Intron Name: Anas_platyrhynchos_platyrhynchos_2_90880103_90880313_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

90880103 - 90880313

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCCCC

5'SS Class:

major

3'SS Sequence:

TCCTCCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

CTGCCCTCAGTG

Flanking Amino Acid:

PYLARRPKLQLSVYTTTRSN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

56.7

42.7

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

81.7

0.71

0.7

72.9

Minor 5ss

32.3

-2

3.2

42.1

44.9

Minor BPS

-0.4

1.8

48.94

Associated Gene:

Gene:

CLPTM1L

Ensembl Gene ID:

ENSAPLG00000004129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042716

90853675 - 90880490

26816

ENSAPLT00000004280

90852129 - 90880490

28362