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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_91060958_91061860_F

Intron Information:

Intron Rank:
134635
Intron Class:
major
Intron Phase:
Intron Coordinates:
91060958 - 91061860
Intron Length:
903

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTGCATCTC
5'SS Class:
major
3'SS Sequence:
GTCCTCTATACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTCCAT
U12 Branch Point Sequence:
TTTCCATAAACT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
72.3
0.53
1
65.7
40.2
Major BPS
77.3
0.68
1.2
86.7
32.3
Major PPT
74.8
0.56
0.9
68.7
36.4
Minor 5ss
31.6
-2.1
3.3
43.8
43.9
Minor BPS
63.8
0.51
2
86.99
38.2

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000022395
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000039059
91060885 - 91062838
1954