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Intron Name: Anas_platyrhynchos_platyrhynchos_2_91125259_91126174_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

91125259 - 91126174

Intron Length:

916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTCAT

U12 Branch Point Sequence:

CGGCGGGTCATG

Flanking Amino Acid:

DHTLSQYQYDRYGGMDGGTR

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

51.9

0.05

1.5

57.1

49.4

Major PPT

65.7

0.35

57.9

38.5

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

25.4

-2

2.5

24.09

36.7

Associated Gene:

Gene:

IRX4

Ensembl Gene ID:

ENSAPLG00000022847

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021041

91123464 - 91132760

9297