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Intron Name: Anas_platyrhynchos_platyrhynchos_2_91744221_91744621_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

91744221 - 91744621

Intron Length:

401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCGCG

5'SS Class:

major

3'SS Sequence:

CCGACCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

TGCCCGCCGACC

Flanking Amino Acid:

ESNETSAEDEGISLHVDSLT

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

56.7

42.7

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

64.9

0.34

0.9

57.3

33.1

Minor 5ss

29.8

-2.3

3.4

47.1

Minor BPS

38.4

-0.9

2.3

49.38

40.7

Associated Gene:

Gene:

IRX2

Ensembl Gene ID:

ENSAPLG00000024367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048352

91741702 - 91750942

9241

ENSAPLT00000031214

91741702 - 91745078

3377

ENSAPLT00000009551

91742781 - 91749921

7141