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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_92112829_92152131_R

Intron Information:

Intron Rank:
144075
Intron Class:
major
Intron Phase:
Intron Coordinates:
92112829 - 92152131
Intron Length:
39303

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAGAAAC
5'SS Class:
strong_major
3'SS Sequence:
TGTTTCCTTTCAG|T
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTACAT
U12 Branch Point Sequence:
TTTTTTTTACAT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
92.4
1
0.8
84.2
26.4
Major BPS
82.7
0.81
0.9
89.3
26.1
Major PPT
87.9
0.85
0.7
85.4
29.3
Minor 5ss
33.8
-1.8
2.9
42.8
44.4
Minor BPS
64.8
0.54
1.7
84.29
36.6

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000024761
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000044382
92112626 - 92165249
52624