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Intron Name: Anas_platyrhynchos_platyrhynchos_2_92284932_92287414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

92284932 - 92287414

Intron Length:

2483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GAATGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

CTTGTCTGAATG

Flanking Amino Acid:

TADLGLFSQMGSQYELKDNP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.2

35.9

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

66.1

0.36

1.1

46.8

Minor 5ss

26.7

-2.7

27.9

37.8

Minor BPS

53.9

-0

1.7

59.15

43.4

Associated Gene:

Gene:

IRX1

Ensembl Gene ID:

ENSAPLG00000021490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044509

92284668 - 92289094

4427

ENSAPLT00000042352

92284668 - 92312055

27388

ENSAPLT00000039323

92284635 - 92289519

4885