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Intron Name: Anas_platyrhynchos_platyrhynchos_2_92288430_92288930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

92288430 - 92288930

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATGTCC

5'SS Class:

major

3'SS Sequence:

TGTCTCCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTATTCTAAATT

Flanking Amino Acid:

PSERTSPKHLERENVPRTES

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

69.4

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

78.4

0.64

0.8

70.3

36.4

Minor 5ss

38.1

-1.3

3.2

51.4

45.3

Minor BPS

0.68

1.6

84.08

37.1

Associated Gene:

Gene:

IRX1

Ensembl Gene ID:

ENSAPLG00000021490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039323

92284635 - 92289519

4885

ENSAPLT00000042352

92284668 - 92312055

27388