About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_92704987_92713585_R

Intron Information:

Intron Rank:
129868
Intron Class:
major
Intron Phase:
Intron Coordinates:
92704987 - 92713585
Intron Length:
8599

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGT|GTAAGCTGA
5'SS Class:
major
3'SS Sequence:
TATTGCATTTCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TATTTAT
U12 Branch Point Sequence:
ATTTATTTATTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
67.2
0.41
1.2
58.9
42.8
Major BPS
88.7
0.96
0.8
78
36.5
Major PPT
78.8
0.65
0.9
74.8
39.5
Minor 5ss
45.2
-0.5
2.9
56.3
47.9
Minor BPS
59.9
0.39
1.7
79.07
37.4

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000017060
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000035734
92702002 - 92713772
11771