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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_92987408_92989039_F

Intron Information:

Intron Rank:
150164
Intron Class:
major
Intron Phase:
Intron Coordinates:
92987408 - 92989039
Intron Length:
1632

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTTCGTATT
5'SS Class:
major
3'SS Sequence:
TACATCCTCCCAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTACAT
U12 Branch Point Sequence:
TTATTCTGCATT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
77.9
0.66
1.2
83.1
35.7
Major BPS
82.7
0.81
0.9
89.3
26.1
Major PPT
71.4
0.48
0.9
61.9
39.4
Minor 5ss
37
-1.5
3
52
44.5
Minor BPS
54.3
0.22
1.9
77.16
39.6

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000030709
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000027280
92987069 - 92991039
3971