About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_93027015_93030551_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
93027015 - 93030551

Intron Length:
3537

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACAGATC

5'SS Class:
major

3'SS Sequence:
TCATTACCTATAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TATTCATGAAAT

Flanking Amino Acid:
QTVGNGHVVKQKLEMNKRPP

Intron Amino Acid Position:
403

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.1
0.54
1.1
70.4
40

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
72.8
0.51
0.8
66.6
34.5

Minor 5ss
35.1
-1.7
3.5
51.2
45.6

Minor BPS
60.5
0.41
1.8
81.5
38.8

Associated Gene:

Gene:
ANKS6

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

93015929 - 93061064
45136