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Intron Name: Anas_platyrhynchos_platyrhynchos_2_93677410_93678380_R


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
93677410 - 93678380

Intron Length:
971

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGTCTT

5'SS Class:
strong_major

3'SS Sequence:
CTTTTTGTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTGACAT

U12 Branch Point Sequence:
TATGTATGGATT

Flanking Amino Acid:
DWTKCVEMDNSQSHALAVKR

Intron Amino Acid Position:
800

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.1
0.92
0.8
83.5
35.1

Major BPS
67.6
0.44
1.2
75
40

Major PPT
88.5
0.86
0.8
84
31

Minor 5ss
46.2
-0.4
2.8
67.2
43.9

Minor BPS
46
-0.2
1.8
65.04
39.7

Associated Gene:

Gene:
ELP2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

93677253 - 93709971
32719