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Intron Name: Anas_platyrhynchos_platyrhynchos_2_93679172_93679672_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
93679172 - 93679672

Intron Length:
501

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATTAAT

5'SS Class:
strong_major

3'SS Sequence:
CTCTTTCTAACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GAATAAA

U12 Branch Point Sequence:
CTCTTTCTAACA

Flanking Amino Acid:
YFVTGSRDKKVIIWGQCDLS

Intron Amino Acid Position:
715

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.5
0.91
0.9
88.9
24.6

Major BPS
53.1
0.08
1.2
56.3
37.2

Major PPT
80.3
0.68
0.8
76.7
30.6

Minor 5ss
37.5
-1.4
2.8
51.2
45.3

Minor BPS
56.8
0.21
1.7
66.77
40.3

Associated Gene:

Gene:
ELP2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

93677253 - 93709971
32719