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Intron Name: Anas_platyrhynchos_platyrhynchos_2_93691547_93694106_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
93691547 - 93694106

Intron Length:
2560

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATGGTCT

5'SS Class:
strong_major

3'SS Sequence:
TTTATTTATTTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTATTTATTT

Flanking Amino Acid:
APWKRKHETEVTWHEVARPQ

Intron Amino Acid Position:
450

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.9
0.78
0.9
74.8
35.8

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
82.1
0.72
0.8
82.1
34.6

Minor 5ss
45.5
-0.5
3.1
65.3
46.1

Minor BPS
64.4
0.53
1.7
84.57
36.4

Associated Gene:

Gene:
ELP2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

93677253 - 93709971
32719