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Intron Name: Anas_platyrhynchos_platyrhynchos_2_93707498_93709272_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
93707498 - 93709272

Intron Length:
1775

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAATAGA

5'SS Class:
strong_major

3'SS Sequence:
CTGATGTGTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTGAT

U12 Branch Point Sequence:
TTCAGCTTAACT

Flanking Amino Acid:
WSGKGVWNDQLVKSVTLEGH

Intron Amino Acid Position:
125

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.9
0.87
0.9
80.4
34.2

Major BPS
91.3
1.03
0.7
79.6
35.6

Major PPT
68.3
0.41
1.1
65
45.5

Minor 5ss
34.4
-1.8
2.8
42.8
44

Minor BPS
68.6
0.66
1.8
84.56
42.1

Associated Gene:

Gene:
ELP2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

93677253 - 93709971
32719