Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_93795390_93799235_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

93795390 - 93799235

Intron Length:

3846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

AATGCTATTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATG

Flanking Amino Acid:

CQCMNELKREVHGAATSLAA

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.4

1.05

0.8

80.7

33.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

58.8

0.2

1.2

54.3

44.1

Minor 5ss

34.5

-1.8

2.8

42.4

44.3

Minor BPS

0.52

1.3

69.97

38.4

Associated Gene:

Gene:

CTNNAL1

Ensembl Gene ID:

ENSAPLG00000008830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009217

93779424 - 93816372

36949

ENSAPLT00000019459

93763255 - 93816372

53118