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Intron Name: Anas_platyrhynchos_platyrhynchos_2_94000229_94003969_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

94000229 - 94003969

Intron Length:

3741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCGTAC

5'SS Class:

weak_major

3'SS Sequence:

CGTTCTTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AATTTTTTACGT

Flanking Amino Acid:

DGMQYRPEVKDASDQREDIY

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.2

62.7

38.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.56

78.8

33.5

Minor 5ss

48.7

-0.1

2.9

66.9

44.7

Minor BPS

51.3

0.12

1.9

70.42

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040668

93888023 - 94012258

124236

ENSAPLT00000009874

93888023 - 94011441

123419