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Intron Name: Anas_platyrhynchos_platyrhynchos_2_94043728_94051356_R


Intron Information:

Intron Rank:
29

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
94043728 - 94051356

Intron Length:
7629

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATATGCA

5'SS Class:
major

3'SS Sequence:
TATTCTTGTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAT

U12 Branch Point Sequence:
TTTTCATTATTC

Flanking Amino Acid:
KLPPDYNPHEVKAQLQKMGA

Intron Amino Acid Position:
2190

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78
0.66
1
70.1
33.9

Major BPS
100
1.24
0.5
100
0

Major PPT
78.1
0.63
0.9
77.6
36.4

Minor 5ss
38.4
-1.3
3.1
50.2
46.2

Minor BPS
65.1
0.45
1.8
79.59
35.6

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

94029068 - 94112558
83491

94029068 - 94111475
82408