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Intron Name: Anas_platyrhynchos_platyrhynchos_2_94067741_94068118_R


Intron Information:

Intron Rank:
22

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
94067741 - 94068118

Intron Length:
378

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAATATT

5'SS Class:
strong_major

3'SS Sequence:
AATTCATTTTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
TGTGACTTAATC

Flanking Amino Acid:
LRITKTTAEEVSEKLSVAAE

Intron Amino Acid Position:
1609

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.2
0.85
0.8
89.3
23.4

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
67.2
0.39
1.1
69.4
40.2

Minor 5ss
35.6
-1.6
3
50.6
45.9

Minor BPS
64.4
0.43
1.6
72.11
39.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

94029068 - 94111475
82408

94029068 - 94112558
83491