Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_94096565_94096651_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94096565 - 94096651

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTATTGTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TGTTTTTTGACT

Flanking Amino Acid:

KDWFEDMMKKIAAAEHGQNL

Intron Amino Acid Position:

666

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

74.1

38.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

0.56

69.6

41.4

Minor 5ss

37.3

-1.4

3.1

47.6

48.1

Minor BPS

76.2

0.9

1.1

87.13

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010146

94029068 - 94112558

83491

ENSAPLT00000045742

94029068 - 94111475

82408