Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_94108524_94109448_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94108524 - 94109448

Intron Length:

925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAA

U12 Branch Point Sequence:

TATACAAAAAAT

Flanking Amino Acid:

LWRKTLKAKKGEHIWIVLDG

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

74.9

34.9

Major BPS

65.8

0.39

73.3

31.3

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

-2.2

3.6

46.5

48.8

Minor BPS

43.1

-0.4

2.2

66.08

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045742

94029068 - 94111475

82408

ENSAPLT00000010146

94029068 - 94112558

83491