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Intron Name: Anas_platyrhynchos_platyrhynchos_2_94206473_94207820_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94206473 - 94207820

Intron Length:

1348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCAAA

U12 Branch Point Sequence:

TGTACCAAAACG

Flanking Amino Acid:

DFIQCCVVLQRLTDVFRRYD

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

54.9

0.12

1.2

Major PPT

77.5

0.62

0.7

75.7

26.4

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

49.3

-0.1

2.1

62.23

44.9

Associated Gene:

Gene:

PDCD6

Ensembl Gene ID:

ENSAPLG00000013444

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014011

94200630 - 94207919

7290

ENSAPLT00000038701

94200630 - 94207919

7290