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Intron Name: Anas_platyrhynchos_platyrhynchos_2_94445248_94447020_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
94445248 - 94447020

Intron Length:
1773

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAAGTAGT

5'SS Class:
strong_major

3'SS Sequence:
TGTTTTAATACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTGTTTTAATA

Flanking Amino Acid:
ILQTGICKYLVGLVVIPDST

Intron Amino Acid Position:
760

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.4
0.93
0.8
83.5
35

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
79.4
0.66
1
74.1
39.5

Minor 5ss
37.6
-1.4
2.8
48.3
42.5

Minor BPS
71.7
0.68
1.3
78
33.3

Associated Gene:

Gene:
TEX10

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

94400169 - 94449408
49240