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Intron Name: Anas_platyrhynchos_platyrhynchos_2_94454243_94457496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94454243 - 94457496

Intron Length:

3254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAA

U12 Branch Point Sequence:

GTCACCTCAAAC

Flanking Amino Acid:

AATVIQRTWRSYHLRQELFR

Intron Amino Acid Position:

964

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

64.3

0.36

65.6

31.9

Major PPT

75.2

0.57

0.8

66.7

35.7

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

52.5

0.06

1.7

61.97

42.6

Associated Gene:

Gene:

INVS

Ensembl Gene ID:

ENSAPLG00000011911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012429

94450541 - 94532276

81736

ENSAPLT00000029568

94451600 - 94526188

74589

ENSAPLT00000027145

94450541 - 94526188

75648