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Intron Name: Anas_platyrhynchos_platyrhynchos_2_94607505_94609858_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

94607505 - 94609858

Intron Length:

2354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TTGTGCTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

86.6

0.82

0.7

85.5

29.2

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

58.9

0.36

79.35

43.5

Associated Gene:

Gene:

STX17

Ensembl Gene ID:

ENSAPLG00000011569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012064

94585262 - 94610713

25452