Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_94652206_94653436_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94652206 - 94653436

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTATT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTATTCGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTCAATT

Flanking Amino Acid:

LELFVLRLSIRSDTAEDKFV

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

90.9

28.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

64.3

0.32

1.7

70.9

43.7

Minor 5ss

47.2

-0.3

2.7

68.8

41.8

Minor BPS

66.9

0.61

1.4

81.89

33.7

Associated Gene:

Gene:

NR4A3

Ensembl Gene ID:

ENSAPLG00000011263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017948

94642086 - 94665768

23683

ENSAPLT00000011742

94642086 - 94662972

20887