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Intron Name: Anas_platyrhynchos_platyrhynchos_2_94660003_94661951_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94660003 - 94661951

Intron Length:

1949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACTAT

U12 Branch Point Sequence:

TATCGGTTTACT

Flanking Amino Acid:

TCEGCKGFFKRTVQKNAKYV

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

62.1

0.3

1.4

61.1

Major PPT

81.3

0.7

0.8

79.7

32.2

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

44.8

-0.3

2.6

70.6

45.8

Associated Gene:

Gene:

NR4A3

Ensembl Gene ID:

ENSAPLG00000011263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017948

94642086 - 94665768

23683

ENSAPLT00000011742

94642086 - 94662972

20887