Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_94998540_95001174_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94998540 - 95001174

Intron Length:

2635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGAGCA

5'SS Class:

major

3'SS Sequence:

GTAACTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TCCTTTGTAACT

Flanking Amino Acid:

GGPTATLQEMGARGSTHSSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

61.4

37.5

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

65.1

0.34

58.3

42.7

Minor 5ss

36.4

-1.5

3.2

39.5

45.9

Minor BPS

0.27

74.22

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011595

94998392 - 95001928

3537