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Intron Name: Anas_platyrhynchos_platyrhynchos_2_95037125_95039211_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
95037125 - 95039211

Intron Length:
2087

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTGAGTTCA

5'SS Class:
major

3'SS Sequence:
ATTCCTTTGCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACATGAT

U12 Branch Point Sequence:
CGGTCTGTGACA

Flanking Amino Acid:
LCKKLNRGAQQYAEELATTR

Intron Amino Acid Position:
36

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.6
0.53
1
67.8
33.4

Major BPS
63.3
0.33
1.1
53.7
41.6

Major PPT
71.4
0.48
1
66.1
40.2

Minor 5ss
37.2
-1.4
2.8
47.2
42.3

Minor BPS
48.3
-0.1
2.1
58.15
42.1

Associated Gene:

Gene:
GLIPR2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

95028404 - 95042393
13990