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Intron Name: Anas_platyrhynchos_platyrhynchos_2_95064845_95065044_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
95064845 - 95065044

Intron Length:
200

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGGGGAGC

5'SS Class:
major

3'SS Sequence:
CGTGTTTTGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGCTCAA

U12 Branch Point Sequence:
ATCTCCTAAGCT

Flanking Amino Acid:
LVDRSAFSEQVESLERSLDE

Intron Amino Acid Position:
85

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1
63.9
42.4

Major BPS
61.8
0.29
1.1
63.4
35.6

Major PPT
72.4
0.5
1.1
68.6
42

Minor 5ss
25.8
-2.8
3.2
33.4
42.1

Minor BPS
59.4
0.37
1.9
78.17
44.2

Associated Gene:

Gene:
BLOC1S4

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

95059854 - 95065296
5443