Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_95207730_95208050_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95207730 - 95208050

Intron Length:

321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGATTTCTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTAAGTCTAATT

Flanking Amino Acid:

RMLRPVSRAFEMEFDLDKAL

Intron Amino Acid Position:

937

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.1

36.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

75.3

0.57

0.8

36.5

Minor 5ss

32.2

-2

3.1

41.8

Minor BPS

47.8

-0

70.07

41.2

Associated Gene:

Gene:

CARMIL1

Ensembl Gene ID:

ENSAPLG00000016185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035110

95186498 - 95368926

182429

ENSAPLT00000016901

95186498 - 95368926

182429