Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_95401155_95401429_R

Intron Information:

Intron Rank:

131623

Intron Class:

major

Intron Phase:

Intron Coordinates:

95401155 - 95401429

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGCTCG

5'SS Class:

major

3'SS Sequence:

TATTTTTGGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

TTCTACCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.1

54.5

45.3

Major BPS

73.1

0.57

71.9

31.3

Major PPT

74.5

0.55

1.1

72.4

42.2

Minor 5ss

43.3

-0.7

3.1

56.8

47.4

Minor BPS

61.5

0.44

1.9

81.7

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035593

95400589 - 95401699

1111