Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_95427353_95454112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95427353 - 95454112

Intron Length:

26760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTACCCTGATG

Flanking Amino Acid:

AGEEDDAFGEGISSQLPEIM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.4

30.4

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

0.83

0.8

84.6

Minor 5ss

37.4

-1.4

3.2

51.9

44.9

Minor BPS

57.6

0.09

1.8

68.33

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047939

95427169 - 95485417

58249

ENSAPLT00000013698

95427292 - 95485417

58126