Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_95455458_95456085_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95455458 - 95456085

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGAGCC

5'SS Class:

major

3'SS Sequence:

TTTGTGTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TTTGTGTTTACA

Flanking Amino Acid:

EVYRALKNGLDEYLEVHQTE

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

39.2

Major BPS

0.28

1.1

63.1

35.8

Major PPT

85.9

0.81

0.9

79.9

37.7

Minor 5ss

-1.9

3.3

39.7

39.8

Minor BPS

48.5

-0.1

2.4

70.34

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047939

95427169 - 95485417

58249

ENSAPLT00000013698

95427292 - 95485417

58126