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Intron Name: Anas_platyrhynchos_platyrhynchos_2_95460157_95461056_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
95460157 - 95461056

Intron Length:
900

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACATCTT

5'SS Class:
major

3'SS Sequence:
TCTTTCAACACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAA

U12 Branch Point Sequence:
TGTCTTTCAACA

Flanking Amino Acid:
INRSYKEYTENMCTIEAELE

Intron Amino Acid Position:
218

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.1
0.66
1
75.3
40.7

Major BPS
78.4
0.71
0.9
81.3
29.8

Major PPT
74.9
0.56
0.9
69.9
34.3

Minor 5ss
38.4
-1.3
3.4
58.7
45.8

Minor BPS
59.4
0.29
1.5
69.57
36.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

95427169 - 95485417
58249

95427292 - 95485417
58126