About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_95789950_95790172_F


Intron Information:

Intron Rank:
127459

Intron Class:
major

Intron Phase:

Intron Coordinates:
95789950 - 95790172

Intron Length:
223

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTCCATCAA

5'SS Class:
major

3'SS Sequence:
TCCTCTTCCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTAAT

U12 Branch Point Sequence:
GTACTAATAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
61.1
0.26
1.4
58.6
42.2

Major BPS
86.7
0.91
0.7
84.2
21.8

Major PPT
75.5
0.57
0.7
69
31.5

Minor 5ss
27.2
-2.6
2.9
32.7
42

Minor BPS
44.2
-0.5
1.8
48.74
38.2

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

95789081 - 95790292
1212