About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_95930365_95930698_R

Intron Information:

Intron Rank:
31
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
95930365 - 95930698
Intron Length:
334

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CTG|GTATGTAGC
5'SS Class:
major
3'SS Sequence:
TTTTTTTTGGAAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TATTTAT
U12 Branch Point Sequence:
TTTTATTTATTT
Flanking Amino Acid:
LHMKRAHGYTGPVQEPASNQ
Intron Amino Acid Position:
1897

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.9
0.7
1
70.6
39.7
Major BPS
88.7
0.96
0.8
78
36.5
Major PPT
77.7
0.62
1.1
82.9
32.5
Minor 5ss
42.3
-0.8
2.5
51.2
40.6
Minor BPS
64.4
0.53
1.7
84.57
36.4

Associated Gene:

Gene:
ZNF236
Ensembl Gene ID:
ENSAPLG00000014682
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000039309
95930237 - 95997992
67756
ENSAPLT00000037802
95930237 - 95997992
67756
ENSAPLT00000025939
95930237 - 95997992
67756
ENSAPLT00000015345
95930237 - 95997992
67756