Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_95985889_95987151_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95985889 - 95987151

Intron Length:

1263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTAAACAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTGTCTTTATTT

Flanking Amino Acid:

HMRDHEQNDKPHRCDQCPMS

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

80.7

31.7

Major BPS

100

1.24

0.5

100

Major PPT

62.7

0.29

1.1

56.6

42.4

Minor 5ss

42.5

-0.8

3.5

64.3

47.2

Minor BPS

69.5

0.69

1.5

83.25

38.8

Associated Gene:

Gene:

ZNF236

Ensembl Gene ID:

ENSAPLG00000014682

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015345

95930237 - 95997992

67756

ENSAPLT00000039309

95930237 - 95997992

67756

ENSAPLT00000037802

95930237 - 95997992

67756

ENSAPLT00000025939

95930237 - 95997992

67756